Public Health Under Fire: HHS and CDC Tensions Explained

In this post I review HHS Secretary Robert Kennedy Jr. at the Senate Finance Committee regarding his dismissal of CDC Director Dr. Susan Monarez and concerns over his anti-vaccine stance. This culminated in resignations from senior CDC officials alarmed by political interference affecting scientific integrity and public health safety.

updated September 20. 2025

This information is current as of the date of original publication or update. It may have changed by the time you read this. I invite you to fact-check what you read here.

This information is not intended for diagnosis or treatment. Before making health decisions, discuss with your physician or other qualified healthcare provider to decide what is right for you.

Kennedy visits the Senate

On September 4, 2025, HHS Secretary Robert Kennedy Jr. appeared before the Senate Finance Committee and was heatedly questioned about several issues. Most of his testimony centered around his firing of the newly confirmed CDC Director Dr. Susan Monarez.

He was also grilled on his seeming lack of support for vaccination as an important public health measure. They questioned why he appointed several antivaccine scientists to the Advisory Committee on Vaccines. Even the Republican Senators who had voted for his appointment expressed frustration with his leadership.

In this post I explain some of what lead to this confrontation.

Trump appoints a CDC Director

After being without a CDC Director since he took office in January 2025, President Trump and the Senate confirmed Dr. Susan Monarez. This is the first time in history that a CDC Director needed Senate approval.

President Trump posted this on social media about his choice for CDC director.

“Dr. Monarez brings decades of experience championing Innovation, Transparency, and strong Public Health Systems. She has a Ph.D. from the University of Wisconsin, and PostDoctoral training in Microbiology and Immunology at Stanford University School of Medicine.

“As an incredible mother and dedicated public servant, Dr. Monarez understands the importance of protecting our children, our communities, and our future. Americans have lost confidence in the CDC due to political bias and disastrous mismanagement.

Dr. Monarez will work closely with our GREAT Secretary of Health and Human Services, Robert Kennedy Jr. Together, they will prioritize Accountability, High Standards, and Disease Prevention to finally address the Chronic Disease Epidemic and, MAKE AMERICA HEALTHY AGAIN!”

President Trump and Secretary Kennedy at the MAHA commission meeting

That was in July 2025. Something changed by late August.

I share this article published by KFF Health News. It was written by Dr. Celine Gounder, a physician and medical journalist who specializes in infectious diseases and global health. She was a member of the COVID-19 Advisory Board of President Joe Biden.

(I have edited the article slightly for length.)

Senior CDC Officials Resign After Dr. Monarez’s Ouster, Citing Concerns Over Scientific Independence

Written by Dr. Céline Gounder August 29, 2025

Four senior officials with the CDC, Centers for Disease Control and Prevention, announced their resignations in recent days, citing what they described as growing political interference in the agency’s scientific work, particularly regarding vaccines.

Two of them — Dr. Debra Houry, the CDC’s chief science and medical officer, and Dr. Demetre Daskalakis, who led the National Center for Immunization and Respiratory Diseases — stepped down on Aug. 27, hours after the White House announced the firing of CDC Director Susan Monarez.

Dr. Monarez, confirmed by the Senate in late July, was removed less than a month into her tenure.

White House spokesperson Kush Desai said Monarez “was not aligned with the President’s agenda of Making America Healthy Again.” Monarez’s attorneys argue that the dismissal is unlawful, as only the apresident can remove a Senate-confirmed director.

On Aug. 28, Jim O’Neill, the deputy secretary of the Department of Health and Human Services, was chosen to serve as acting CDC director. In an internal email sent to CDC staffers Secretary Robert F. Kennedy Jr. confirmed O’Neill as the acting CDC director without addressing Monarez’s departure. 

“I am committed to working with you to restore trust, transparency, and credibility to the CDC,” Kennedy told CDC employees, later writing that

“President Trump and I are aligned on the commonsense vision for the CDC: Strengthen the public health infrastructure by returning to its core mission of protecting Americans from communicable diseases by investing in innovation to prevent, detect, and respond to future threats.”

HHS Secretary Robert Kennedy, Jr.

Concern for Vaccine Policy

Houry and Daskalakis said they had become increasingly uneasy about how vaccine policy was being handled. Both pointed to preparations for the Advisory Committee on Immunization Practices, ACIP, meeting, which recommends vaccine schedules.

Houry said they feared “some decisions had been made before there was even the data or the science to support those. We are scientists, and that was concerning to us.”

Daskalakis added that he was “very concerned that there’s going to be an attempt to relitigate vaccines that have already had clear recommendations with science that has been vetted,” which he warned could undermine public trust. “If you can’t attack access, then why not attack trust? And that’s what I think the playbook is,” he said.

“there’s going to be an attempt to relitigate vaccines that have already had clear recommendations with science that has been vetted,

If you can’t attack access, then why not attack trust? And that’s what I think the playbook is,”

Dr. Demetre Daskalakis

Lack of communication and transparency

Both officials cited instances in which evidence reviews were altered or withdrawn. A CDC analysis of thimerosal, a vaccine preservative, was briefly posted before being taken down at the HHS’ direction.

“If there’s something that doesn’t line up with the recommendations, then that information will be taken down, and it’s not there for the public to see for openness and transparency,” Houry said.

The two also criticized the lack of direct communication between CDC scientists and HHS leadership. Daskalakis said his team was never invited to brief Kennedy on measles and COVID-19.

When asked about Kennedy’s calls for “radical transparency,” Houry and Daskalakis learned about changes to the COVID-19 vaccine schedule for children through social media, not through internal channels.

“The radical transparency manifested itself by a Twitter post, which is how Dr. Houry and I learned that the secretary had mandated the change in the children’s vaccine schedule for COVID,” Daskalakis recalled.

“What is the background that led to that decision? And we were denied access to that information. So, I don’t think that that’s radically transparent,” Daskalakis said.

CBS News and KFF Health News reached out to HHS for comment on some of the allegations made by Houry and Daskalakis but did not immediately hear back.

Scientists Raise An Alarm for Public Health

Both officials said they had no jobs lined up when they resigned. Houry described the decision as an effort to raise the alarm about the direction of the agency.

“For us, this was really sending out a bat signal,” Houry said. “We were the very senior scientists and career leaders at CDC. We thought this was the time to stand together and try to do what we could to raise the alarm around public health in our country.”

Daskalakis said remaining at the CDC under current conditions would have made them complicit in what he called the “weaponization” of public health.

“The safety has already been compromised. … We are flying blind in the U.S. already. If we continued … we would be complicit and would be facilitating the ability to go from flying blind to actively harming people,” he said.

Houry emphasized the severity of the moment by noting that she left without a backup plan.

“My leaving without a job was really just showing how dire the circumstances had become,” Houry said.

Daskalakis said his decision was also shaped by his medical oath.

“As a physician, I take the Hippocratic oath: First, do no harm. I am seeing ideology permeating science in a way that is going to harm children and adults. … I think we are seeing things that are happening that are making our country less prepared to be able to respond to the everyday pathogens … but also … to the next big thing.”

Both also expressed concerns about their personal safety in the current climate.

“The environment we live in … stoked by misinformation, especially from people considered by some to be health authorities, makes me worried for all of us in public health,” Daskalakis said. “I am concerned, but that’s part of our job … to be brave and continue to speak the truth even when we are outside of the CDC.”

Photo by Photo By: Kaboompics.com on Pexels.com

Gun Violence-Another Public Health Issue

The resignations came weeks after a shooting outside the CDC’s Atlanta headquarters, which law enforcement linked to COVID misinformation.

Houry said the White House response to the shooting was muted. Kennedy toured the site but later gave an interview expressing distrust of experts.

“That was after the attack. It was based on COVID misinformation. So this is when we were trying to build trust,” she said.

Daskalakis added that while Kennedy later described mass shootings as a public health crisis, he believed the secretary should address misinformation as a root cause.

“The misinformation about the COVID-19 vaccine — that has been documented by the Georgia Bureau of Investigation” as the reason for the CDC shooting. “I would really recommend that the secretary actually do take his own advice and actually address the core problem that led to that shooting as well,” he said.

He also noted that the CDC’s gun violence prevention programs had been sharply reduced. “We talk about violence as a public health problem.

It is, and there’s things we can do to prevent it. Unfortunately, the majority of that program, the staff are terminated,” he said.

“We talk about violence as a public health problem.
It is, and there’s things we can do to prevent it. Unfortunately, the majority of that program, the staff are terminated,”

Dr. Daskalakis

The firings and resignations have sparked calls for oversight. Independent Sen. Bernie Sanders of Vermont called for a bipartisan investigation, Democratic Sen. Patty Murray of Washington urged Kennedy’s removal, and Republican Sen. Bill Cassidy of Louisiana — who voted to confirm Kennedy’s appointment as HHS secretary — said the developments would “require oversight.”

The events come as the FDA narrowed eligibility for updated COVID-19 vaccines to older adults and people with risk factors for severe COVID.

KFF Health News is a national newsroom that produces in-depth journalism about health issues and is one of the core operating programs at KFF—an independent source of health policy research, polling, and journalism. Learn more about KFF.

Subscribe to KFF Health News’ free Morning Briefing.

This article first appeared on KFF Health News and is republished here under a Creative Commons Attribution-NoDerivatives 4.0 International License.

Dr. Monarez Speaks to the Senate

On September 17, 2025, “She testified that she was ousted last month because she refused to cede to Health Secretary Robert F. Kennedy Jr.’s demands to pre-approve vaccine recommendations for the public and fire career scientists.

“He just wanted blanket approval,” Monarez told members of the Senate Committee on Health, Education, Labor and Pensions on Wednesday. “Even under pressure, I could not replace evidence with ideology.”

Monarez described a string of events that she said eventually led to her dismissal, culminating with a “tense” meeting in late August when she clashed with Kennedy over his plans for an influential CDC committee that issues recommendations on vaccines.”

Read the full report from NPR at this link

Ousted CDC director testifies she was fired for resisting pressure from RFK Jr.

Learn about the CDC

I hope you will take the time to learn more about the Centers for Disease Control and Prevention. According to the website, the

  • CDC is the nation’s leading science-based, data-driven, service organization that protects the public’s health.
  • CDC puts science into action to help children stay healthy so they can grow and learn; to help families, businesses, and communities fight disease and stay strong; and to protect the public’s health.

The professionals at the CDC cannot do their job alone. They need the support of elected and appointed government officials and the people they serve.

Health and safety threats are often new and unpredictable, like a viral pandemic or natural disaster, and multiple agencies need to work together to successfully manage threats. Cooperation and support are needed. Blaming and accusations are unproductive and unprofessional and contribute to lack of trust by the people they serve.

Post Graphics

The two graphics about vaccines are currently on the CDC website. The cover photo of CDC headquarters is also on the site.

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Medical stethoscope and heart on a textured background

Dr Aletha

Measles Outbreak: Highest Cases in 33 Years Across 39 States

This post highlights a recent news article that caught my attention. The measles outbreak in the U.S. has escalated sharply, with 1,289 cases reported in 39 states, the highest count since 1992. States like South Carolina and Wyoming report new infections, raising concerns about vaccination accessibility and public health.

When I first wrote about the current measles outbreak in the United States, fourteen states had reported cases. According to a recent news report, that number has almost tripled, and the number of documented cases is the highest since the last century.

This information is current as of the date of original publication or update. It may have changed by the time you read this. I invite you to fact-check what you read here.

This information is not intended for diagnosis or treatment. Before making health decisions, discuss with your physician or other qualified healthcare provider to decide what is right for you.

The following report is republished here by permission

Measles reaches highest level in 33 years, now in 39 states

by Tim Henderson, Oklahoma Voice
July 14, 2025

Measles cases have surpassed a recent 2019 record to reach the highest level since 1992, with at least 1,289 cases reported in 39 states.

The milestone comes as health officials are increasingly alarmed by vaccine skepticism gaining a voice in the Trump administration under U.S. Department of Health and Human Services Secretary Robert F. Kennedy Jr.

Pediatricians and public health associations filed a federal lawsuit this month challenging a May directive by Kennedy, claiming it “creates barriers” to vaccination for pregnant women and young children.

“Because of his name and profile, Mr. Kennedy has been instrumental in increasing the levels of vaccine hesitancy and skepticism in this country,” the lawsuit states. “The Secretary’s dismantling of the vaccine infrastructure must end.”

Measles is highly contagious and spreads through the air when an infected person coughs or sneezes.

CDC Measles Statistics Report

The federal Centers for Disease Control and Prevention reported Wednesday that there were 1,288 cases in 38 states, surpassing the 2019 level of 1,274. South Carolina later reported its own first case of the year, an unvaccinated international traveler in the northwestern Upstate area of the state.

Wyoming reported its first measles case since 2010 on July 1, an unvaccinated child in Natrona County.

Other states recently joining the list: North Carolina reported its first case of the year June 24, in a child visiting Forsyth and Guilford counties from another country.

And Oregon reported a case the same day for a person identified only as an unvaccinated international traveler sickened in June after returning to the Portland area.

“We’re here to tell you that measles is now in Oregon, and if you’re not vaccinated, you are susceptible,” said Dr. Paul R. Cieslak, medical director for communicable diseases and immunizations at the Oregon Health Authority’s Public Health Division.

Measles is one of the most contagious diseases and can spread rapidly among unvaccinated people.

Utah reported its first case June 20, an unvaccinated person with no recent travel out of state. The state now has nine cases, mostly in Utah County, where Provo is located.

Confirmed cases this year were also reported in these other states: Alaska, Arizona, Arkansas, California, Colorado, Florida, Georgia, Hawaii, Illinois, Indiana, Iowa, Kansas, Kentucky, Louisiana, Maryland, Michigan, Minnesota, Missouri, Montana, Nebraska, New Jersey, New Mexico, New York, North Dakota, Ohio, Oklahoma, Pennsylvania, Rhode Island, South Dakota, Tennessee, Texas, Vermont, Virginia and Washington.

Stateline reporter Tim Henderson can be reached at thenderson@stateline.org.

Oklahoma Voice is part of States Newsroom, a nonprofit news network supported by grants and a coalition of donors as a 501c(3) public charity. Oklahoma Voice maintains editorial independence. Contact Editor Janelle Stecklein for questions: info@oklahomavoice.com.

More on this blog about measles

What you need to know about Measles

Measles, or rubeola, is a viral infection characterized by a spreading rash, cough, and inflamed eyes. While largely controlled since the vaccine’s introduction in 1963, recent outbreaks reflect setbacks in disease management. Serious complications can occur. Vaccination remains crucial for prevention. Consult healthcare professionals before dismissing vaccines.

Keep reading

How to be Aware and Prepared for Measles

My home state Oklahoma confirmed its first two measles cases on March 11, 2025, linked to outbreaks in neighboring Texas and New Mexico. This is added to outbreaks in at least 12 other states. Viruses don’t recognize state lines or international borders, so everyone needs to be aware and prepared for its arrival.

Keep reading
Photo by rawpixel.com on Pexels.com

Exploring the HEART of Health

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I’d love for you to follow this blog. I share information and inspiration to help you turn health challenges into health opportunities.

Add your name to the subscribe box to be notified of new posts by email. Click the link to read the post and browse other content. It’s that simple. No spam.

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Medical stethoscope and heart on a textured background

Dr Aletha